BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039G02LP1|AL430746
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1052 1550 0.0
>3x_Contig1052
Length = 4051
Score = 1550 bits (782), Expect = 0.0
Identities = 795/798 (99%), Gaps = 1/798 (0%)
Strand = Plus / Plus
Query: 120 ttaatcgccaaatggaccaaaccatcactatcagttaccaccatgaaggtgagtggacca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ttaatcgccaaatggaccaaaccatcactatcagttaccaccatgaaggtgagtggacca 62
Query: 180 tgtgaaccgacagtcattccacaatctgcctctgttgacatatcaattcgattggttcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgtgaaccgacagtcattccacaatctgcctctgttgacatatcaattcgattggttcct 122
Query: 240 ggtcaagatctcaatgtcatcaaacagtcattgaatgactacttgcattcatgcttttca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggtcaagatctcaatgtcatcaaacagtcattgaatgactacttgcattcatgcttttca 182
Query: 300 agattgaagaccaaaaatcatctctctatcaaggtattaaatgaagcagaaccttggtta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agattgaagaccaaaaatcatctctctatcaaggtattaaatgaagcagaaccttggtta 242
Query: 360 ggaaatccttcgaatagtgcctatcaaattataagagaggaaataggcaaagaatggaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ggaaatccttcgaatagtgcctatcaaattataagagaggaaataggcaaagaatggaac 302
Query: 420 acagaacctttaatggtgagagaaggaggttccattccaagtattagataccttgagcaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 303 acagaacctttaatggtgagagaaggaggttccattccaagtattagataccttgag-aa 361
Query: 480 gactttgggcgcccctgtcgtacaaataccttgtggccaatcaaatgataaagcacatct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gactttgggcgcccctgtcgtacaaataccttgtggccaatcaaatgataaagcacatct 421
Query: 540 accaaatgaacagttaagaatgacaaactggtataagatgagagagattcttaccagagt 599
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 422 accaaatgaacagttaagaatgaaaaactggtataagatgagagagattcttaccagagt 481
Query: 600 attcaataggctctgaatccacactatcttatcaattgcatttgcttttttcgcacgtca 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 482 attcaataggctctgaatccacactatcttatcaattgcatttgcttttttcgcacgtaa 541
Query: 660 catgatattatttaattacatatatccacactaatccgcattgaacagcatcacttaatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 catgatattatttaattacatatatccacactaatccgcattgaacagcatcacttaatg 601
Query: 720 aatatatttgaacataccaacgcagagttctgacagcctaaccttcgtcaaatttacata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatatatttgaacataccaacgcagagttctgacagcctaaccttcgtcaaatttacata 661
Query: 780 actcttcaactgattggtatgtatctctcttggcatccacatgtatccgggtaacaaaag 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 actcttcaactgattggtatgtatctctcttggcatccacatgtatccgggtaacaaaag 721
Query: 840 aagattcagatatctccgagctcccttgaattgaatcataaaagtatggataagtaaact 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aagattcagatatctccgagctcccttgaattgaatcataaaagtatggataagtaaact 781
Query: 900 agaacacaggggtcgtac 917
||||||||||||||||||
Sbjct: 782 agaacacaggggtcgtac 799
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7149
Number of Sequences: 1807
Number of extensions: 7149
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)